Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs78590158 chr14:105076176 T/C 0 168 22.57 22.78 1.67 KM Plot
UCEC rs78824213 chr7:20656505 C/T 0 173 22.67 20.13 4.33 KM Plot
UCEC rs78898062 chr14:73360842 G/T 5.77E-7 172 22.8 21.27 10.33 KM Plot
UCEC rs79044457 chr15:42895208 G/T 6.03E-5 174 21.9 25.55 22.43 KM Plot
UCEC rs79217266 chr7:20656305 T/C 0 173 22.67 20.13 4.33 KM Plot
UCEC rs79234886 chr14:73380372 A/G 6.53E-7 169 22.8 21.03 10.33 KM Plot
UCEC rs79327123 chr7:64189070 T/G 0 174 22.57 22.93 2.4 KM Plot
UCEC rs79487016 chr7:20653986 G/A 0 173 22.67 20.13 4.33 KM Plot
UCEC rs79578615 chr7:20643760 T/C 0 172 22.7 20.13 4.33 KM Plot
UCEC rs79616802 chr2:98277090 T/C 2.67E-10 173 25.67 18.88 2.4 KM Plot
UCEC rs79632638 chr2:12856531 A/C 1.14E-8 169 22.6 24.63 4.5 KM Plot
UCEC rs79649494 chr14:73352552 T/G 5.77E-7 172 22.8 21.27 10.33 KM Plot
UCEC rs79817382 chr12:1153019 A/G 3.82E-7 170 22.7 11.47 41.98 KM Plot
UCEC rs79819349 chr14:73540138 G/A 4.47E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs79904744 chr7:20669814 T/A 1.29E-11 172 22.63 20.13 4.33 KM Plot